imageware
Class ShortProcess

java.lang.Object
  imageware.ShortBuffer
      imageware.ShortAccess
          imageware.ShortPointwise
              imageware.ShortProcess

All Implemented Interfaces:

Access, Buffer, Pointwise, Process

Direct Known Subclasses:

ShortSet

public class ShortProcess
extends ShortPointwise
implements Process

Class ShortProcess.

Field Summary

Fields inherited from class imageware.ShortBuffer

data, nx, nxy, ny, nz

Constructor Summary

protected	ShortProcess(byte[][][] array, int mode)
protected	ShortProcess(byte[][] array, int mode)
protected	ShortProcess(byte[] array, int mode)
protected	ShortProcess(double[][][] array, int mode)
protected	ShortProcess(double[][] array, int mode)
protected	ShortProcess(double[] array, int mode)
protected	ShortProcess(float[][][] array, int mode)
protected	ShortProcess(float[][] array, int mode)
protected	ShortProcess(float[] array, int mode)
protected	ShortProcess(java.awt.Image image, int mode)
protected	ShortProcess(ij.ImageStack stack, byte chan)
protected	ShortProcess(ij.ImageStack stack, int mode)
protected	ShortProcess(int nx, int ny, int nz)
protected	ShortProcess(short[][][] array, int mode)
protected	ShortProcess(short[][] array, int mode)
protected	ShortProcess(short[] array, int mode)

Method Summary

void	add(ImageWare imageware) Add a imageware to the current imageware.
void	divide(ImageWare imageware) Divide a imageware to the current imageware.
void	max(ImageWare imageware) Get the maximum of this imageware and a imageware.
void	min(ImageWare imageware) Get the minimum of this imageware and a imageware.
void	multiply(ImageWare imageware) Multiply a imageware to the current imageware.
void	smoothGaussian(double sigma) Apply a separable gaussian smoothing over the image with the same strengthness in all directions.
void	smoothGaussian(double sigmaX, double sigmaY, double sigmaZ) Apply a separablegaussian smoothing over the image with an independant strengthness in the different directions.
void	subtract(ImageWare imageware) Subtract a imageware to the current imageware.

Methods inherited from class imageware.ShortPointwise

abs, add, addGaussianNoise, addSaltPepper, addUniformNoise, buildImageStack, clip, clip, divide, exp, fillConstant, fillGaussianNoise, fillRamp, fillSaltPepper, fillUniformNoise, invert, log, multiply, negate, pow, rescale, rescale, rescaleCenter, sqr, sqrt, subtract, threshold, threshold, thresholdHard, thresholdSoft

Methods inherited from class imageware.ShortAccess

getBlockX, getBlockX, getBlockX, getBlockX, getBlockXY, getBlockXY, getBlockXY, getBlockXY, getBlockXYZ, getBlockXYZ, getBlockXYZ, getBlockXYZ, getBlockXZ, getBlockXZ, getBlockXZ, getBlockXZ, getBlockY, getBlockY, getBlockY, getBlockY, getBlockYZ, getBlockYZ, getBlockYZ, getBlockYZ, getBlockZ, getBlockZ, getBlockZ, getBlockZ, getBoundedX, getBoundedX, getBoundedX, getBoundedX, getBoundedXY, getBoundedXY, getBoundedXY, getBoundedXY, getBoundedXYZ, getBoundedXYZ, getBoundedXYZ, getBoundedXYZ, getBoundedXZ, getBoundedXZ, getBoundedXZ, getBoundedXZ, getBoundedY, getBoundedY, getBoundedY, getBoundedY, getBoundedYZ, getBoundedYZ, getBoundedYZ, getBoundedYZ, getBoundedZ, getBoundedZ, getBoundedZ, getBoundedZ, getInterpolatedPixel, getInterpolatedPixel, getNeighborhoodX, getNeighborhoodX, getNeighborhoodX, getNeighborhoodX, getNeighborhoodXY, getNeighborhoodXY, getNeighborhoodXY, getNeighborhoodXY, getNeighborhoodXYZ, getNeighborhoodXYZ, getNeighborhoodXYZ, getNeighborhoodXYZ, getNeighborhoodXZ, getNeighborhoodXZ, getNeighborhoodXZ, getNeighborhoodXZ, getNeighborhoodY, getNeighborhoodY, getNeighborhoodY, getNeighborhoodY, getNeighborhoodYZ, getNeighborhoodYZ, getNeighborhoodYZ, getNeighborhoodYZ, getNeighborhoodZ, getNeighborhoodZ, getNeighborhoodZ, getNeighborhoodZ, getPixel, getPixel, putBoundedX, putBoundedX, putBoundedX, putBoundedX, putBoundedXY, putBoundedXY, putBoundedXY, putBoundedXY, putBoundedXYZ, putBoundedXYZ, putBoundedXYZ, putBoundedXYZ, putBoundedXZ, putBoundedXZ, putBoundedXZ, putBoundedXZ, putBoundedY, putBoundedY, putBoundedY, putBoundedY, putBoundedYZ, putBoundedYZ, putBoundedYZ, putBoundedYZ, putBoundedZ, putBoundedZ, putBoundedZ, putBoundedZ, putPixel

Methods inherited from class imageware.ShortBuffer

getDepth, getDimension, getHeight, getSize, getSizeX, getSizeY, getSizeZ, getSliceByte, getSliceDouble, getSliceFloat, getSliceShort, getTotalSize, getType, getTypeToString, getVolume, getWidth, getX, getX, getX, getX, getX, getXY, getXY, getXY, getXY, getXY, getXYZ, getXYZ, getXYZ, getXYZ, getXYZ, getXZ, getXZ, getXZ, getXZ, getXZ, getY, getY, getY, getY, getY, getYZ, getYZ, getYZ, getYZ, getYZ, getZ, getZ, getZ, getZ, getZ, isSameSize, putX, putX, putX, putX, putX, putXY, putXY, putXY, putXY, putXY, putXYZ, putXYZ, putXYZ, putXYZ, putXYZ, putXZ, putXZ, putXZ, putXZ, putXZ, putY, putY, putY, putY, putY, putYZ, putYZ, putYZ, putYZ, putYZ, putZ, putZ, putZ, putZ, putZ, throw_constructor, throw_constructor, throw_get, throw_put

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface imageware.Pointwise

abs, add, addGaussianNoise, addSaltPepper, addUniformNoise, buildImageStack, clip, clip, divide, exp, fillConstant, fillGaussianNoise, fillRamp, fillSaltPepper, fillUniformNoise, invert, log, multiply, negate, pow, rescale, rescale, rescaleCenter, sqr, sqrt, subtract, threshold, threshold, thresholdHard, thresholdSoft

Methods inherited from interface imageware.Access

getBlockX, getBlockX, getBlockX, getBlockX, getBlockXY, getBlockXY, getBlockXY, getBlockXY, getBlockXYZ, getBlockXYZ, getBlockXYZ, getBlockXYZ, getBlockXZ, getBlockXZ, getBlockXZ, getBlockXZ, getBlockY, getBlockY, getBlockY, getBlockY, getBlockYZ, getBlockYZ, getBlockYZ, getBlockYZ, getBlockZ, getBlockZ, getBlockZ, getBlockZ, getBoundedX, getBoundedX, getBoundedX, getBoundedX, getBoundedXY, getBoundedXY, getBoundedXY, getBoundedXY, getBoundedXYZ, getBoundedXYZ, getBoundedXYZ, getBoundedXYZ, getBoundedXZ, getBoundedXZ, getBoundedXZ, getBoundedXZ, getBoundedY, getBoundedY, getBoundedY, getBoundedY, getBoundedYZ, getBoundedYZ, getBoundedYZ, getBoundedYZ, getBoundedZ, getBoundedZ, getBoundedZ, getBoundedZ, getInterpolatedPixel, getInterpolatedPixel, getNeighborhoodX, getNeighborhoodX, getNeighborhoodX, getNeighborhoodX, getNeighborhoodXY, getNeighborhoodXY, getNeighborhoodXY, getNeighborhoodXY, getNeighborhoodXYZ, getNeighborhoodXYZ, getNeighborhoodXYZ, getNeighborhoodXYZ, getNeighborhoodXZ, getNeighborhoodXZ, getNeighborhoodXZ, getNeighborhoodXZ, getNeighborhoodY, getNeighborhoodY, getNeighborhoodY, getNeighborhoodY, getNeighborhoodYZ, getNeighborhoodYZ, getNeighborhoodYZ, getNeighborhoodYZ, getNeighborhoodZ, getNeighborhoodZ, getNeighborhoodZ, getNeighborhoodZ, getPixel, getPixel, putBoundedX, putBoundedX, putBoundedX, putBoundedX, putBoundedXY, putBoundedXY, putBoundedXY, putBoundedXY, putBoundedXYZ, putBoundedXYZ, putBoundedXYZ, putBoundedXYZ, putBoundedXZ, putBoundedXZ, putBoundedXZ, putBoundedXZ, putBoundedY, putBoundedY, putBoundedY, putBoundedY, putBoundedYZ, putBoundedYZ, putBoundedYZ, putBoundedYZ, putBoundedZ, putBoundedZ, putBoundedZ, putBoundedZ, putPixel

Methods inherited from interface imageware.Buffer

getDepth, getDimension, getHeight, getSize, getSizeX, getSizeY, getSizeZ, getSliceByte, getSliceDouble, getSliceFloat, getSliceShort, getTotalSize, getType, getTypeToString, getVolume, getWidth, getX, getX, getX, getX, getX, getXY, getXY, getXY, getXY, getXY, getXYZ, getXYZ, getXYZ, getXYZ, getXYZ, getXZ, getXZ, getXZ, getXZ, getXZ, getY, getY, getY, getY, getY, getYZ, getYZ, getYZ, getYZ, getYZ, getZ, getZ, getZ, getZ, getZ, isSameSize, putX, putX, putX, putX, putX, putXY, putXY, putXY, putXY, putXY, putXYZ, putXYZ, putXYZ, putXYZ, putXYZ, putXZ, putXZ, putXZ, putXZ, putXZ, putY, putY, putY, putY, putY, putYZ, putYZ, putYZ, putYZ, putYZ, putZ, putZ, putZ, putZ, putZ

Constructor Detail

ShortProcess

protected ShortProcess(int nx,
                       int ny,
                       int nz)

ShortProcess

protected ShortProcess(java.awt.Image image,
                       int mode)

ShortProcess

protected ShortProcess(ij.ImageStack stack,
                       int mode)

ShortProcess

protected ShortProcess(ij.ImageStack stack,
                       byte chan)

ShortProcess

protected ShortProcess(byte[] array,
                       int mode)

ShortProcess

protected ShortProcess(byte[][] array,
                       int mode)

ShortProcess

protected ShortProcess(byte[][][] array,
                       int mode)

ShortProcess

protected ShortProcess(short[] array,
                       int mode)

ShortProcess

protected ShortProcess(short[][] array,
                       int mode)

ShortProcess

protected ShortProcess(short[][][] array,
                       int mode)

ShortProcess

protected ShortProcess(float[] array,
                       int mode)

ShortProcess

protected ShortProcess(float[][] array,
                       int mode)

ShortProcess

protected ShortProcess(float[][][] array,
                       int mode)

ShortProcess

protected ShortProcess(double[] array,
                       int mode)

ShortProcess

protected ShortProcess(double[][] array,
                       int mode)

ShortProcess

protected ShortProcess(double[][][] array,
                       int mode)

Method Detail

smoothGaussian

public void smoothGaussian(double sigma)

Apply a separable gaussian smoothing over the image with the same strengthness in all directions. To have a smmothing effect the strengthness should be strictly greater than 0 and the size in the considered directions should be greater strictly than 1.

Specified by:

smoothGaussian in interface Process

Parameters:

sigma - Strengthness of the smoothing

smoothGaussian

public void smoothGaussian(double sigmaX,
                           double sigmaY,
                           double sigmaZ)

Apply a separablegaussian smoothing over the image with an independant strengthness in the different directions. To have a smmothing effect the strengthness should be strictly greater than 0 and the size in the considered directions should be greater strictly than 1.

Specified by:

smoothGaussian in interface Process

Parameters:

sigmaX - Strengthness of the smoothing in X axis

sigmaY - Strengthness of the smoothing in X axis

sigmaZ - Strengthness of the smoothing in X axis

max

public void max(ImageWare imageware)

Get the maximum of this imageware and a imageware.

Specified by:

max in interface Process

Parameters:

imageware - imageware to max

min

public void min(ImageWare imageware)

Get the minimum of this imageware and a imageware.

Specified by:

min in interface Process

Parameters:

imageware - imageware to min

add

public void add(ImageWare imageware)

Add a imageware to the current imageware.

Specified by:

add in interface Process

Parameters:

imageware - imageware to add

multiply

public void multiply(ImageWare imageware)

Multiply a imageware to the current imageware.

Specified by:

multiply in interface Process

Parameters:

imageware - imageware to multiply

subtract

public void subtract(ImageWare imageware)

Subtract a imageware to the current imageware.

Specified by:

subtract in interface Process

Parameters:

imageware - imageware to subtract

divide

public void divide(ImageWare imageware)

Divide a imageware to the current imageware.

Specified by:

divide in interface Process

Parameters:

imageware - imageware to divide